Have you tested the ignition wire, starter wire, accessory wire and that you have connected them correctly to the vehicle's main harness? Have a look there.
96 Lexus ES300
| ITEM | WIRE COLOR |POL| WIRE LOCATION |
| 12V|white and WHITE/ red |+ |ignition harness |
| STARTER|BLACK/ white |+ |ignition harness |
| IGNITION|BLACK / YELLOW |+ |ignition harness |
| SECOND IGNITION|BLACK/ orange |+ |ignition harness |
| ACCESSORY|pink/blue |+ |ignition harness |
| POWER LOCK|yellow/red |- |pass kick or theft ecu *2 |
| POWER UNLOCK|yellow/blue |- |pass kick or theft ecu *2 |
| PARKING LIGHTS +|GREEN/ silver dots | |fusebox |
| PARKING LIGHTS -|green | |steering column |
| HEADLIGHTS|RED / yellow |- |steering column |
| DOOR TRIGGER|RED / white |- |bottom of fusebox *3 |
| TRUNK/HATCH PIN|RED / white |- |theft ecu *2 |
| HOOD PIN|black |- |theft ecu *2 |
|TRNK/HTCH RELEASE|red |- |driver's kick panel |
| FCTRY ALARM ARM|arms with lock | | |
|FCTRY ALRM DISARM|with unlock *4 | | |
| TACHOMETER|black | |check connector *1 |
| BRAKE WIRE|GREEN / WHITE |+ |drivers kick panel |
| HORN TRIGGER|GREEN/ black |- |theft ecu *2 |
| WIPERS| | | |
| LF WINDOW UP/DN|green - red |A |at switch |
| RF WINDOW UP/DN|GREEN / WHITE-RED / blue|A |at switch |
| LR WINDOW UP/DN|GREEN/ YELLOW-RED / yel|A |at switch |
| RR WINDOW UP/DN|GREEN/ black-RED / blk |A |at switch |
Notes:
*1 The check connector is found between the right shock tower and the firewall. Also locate at drivers side inner fender. *2 The theft ECU is found behind and to the right of the glovebox. *3 Located in a white plug. *4 to disarm without unlocking, give a negative pulse to the smaller gauge RED / blue wire in the drivers kick panel.
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Be careful whose advice you buy, but be patient with those who supply it.

Your starter disable wire is not wired correctly. Probably backwards. YELLOW wire goes to the motor side and YELLOW/BLACK goes to the switch side. Make sure of this and post your results.
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Jeff
Velocity Custom Home Theater
Mobile Audio/Video Specialist
Morden, Manitoba CANADA