2005 Mustang DEI bypass module

I have a 2005 mustang GT 5 speed and I put in a compustar 2wss-as

I put the transponder ring around the key cylinder and the first time I went to remote start it it did nothing and the immobilizer light on the dash began flashing Then I moved the transponder ring infront of the factory ring and remote started it again this time the car went through the proper cycle of the ignition turning on and all that but it never started, it didn't even try to start

I am using the DEI 556U with the key in the box, but it seems it is not reading the chip in the key correctly

I know that everything else is installed correctly, as this is what I do for a living, is this the proper bypass for the car or is there another one I could use

Or if anyone has any other ideas that may help me would be appreciated

Thanks Mike

Oh crap, the clutch bypass I totally forgot about that

with the compustar alarm/remote start how do i do that?   cause where I work we have never been able to install the remote starts on a manual car untill now (liability issues)

who freaks out the car or the people at ford? and what do u mean learned that the hard way

actually I am not sure if I have to  do the clutch bypass, or do I ?

because the compustar remote start brain that I got is actually made for the manual transmission