2006 mustang door triggers

hmm I think I may have figured out what happened. On the starter kill and ignition kill wires I may have put them to the wrong side and in turn put the remote starter wire on the wrong side as well. If my car is armed/going off will it still start with the wires crossed.

I think you have gone to a pos light feed or you've connected purple rather than green for your door contacts. Don't need a 10kr if you separate the  door feeds with diodes (band side away from alarm) also diodes band side to alarm between CPU and alarm junction points on both door contact leads. This will prevent wake-up surge from the body CPU. Hood switch is open circuit when hood opened, also haven't  told us where your power cables are routed to?

power is directly to the fuse box with fuses.